RNA-Seq of Oryza sativa Indica Group IR28 13dpi: U.virens conidia ino... - SRA

SRX24586524: RNA-Seq of Oryza sativa Indica Group IR28 13dpi: U.virens conidia inoculation 1 dpi replicate 2
1 ILLUMINA (Illumina HiSeq 2000) run: 23.6M spots, 7.1G bases, 2.2Gb downloads

Design: IR28 U.virens conidia inoculation 13 dpi replicate 2

Submitted by: Hubei Academy of Agricultural Sciences

Study: Transcriptome analysis of cultivar IR28 and WX98 during Ustilaginoidea virens infection

PRJNA1112547 • SRP508247 • All experiments • All runs

show Abstracthide Abstract

Rice false smut is caused by the ascomycete fungal pathogen Ustilaginoidea virens (Cooke) Takahashi. It hijacks host nutrients for mycelial growth and forms false smut balls in rice flowers leading to grain contamination of poisonous mycotoxins.Due to the infection rate and number of smut balls in resistant cultivar IR28 were significantly lower than those of susceptible cultivar WX98 during conidia injection inoculation. Thus, a compared transcriptome analysis between IR28 and WX98 was deployed during U. virens infection.

Sample: IR28_13dpi_r2

SAMN41430546 • SRS21326194 • All experiments • All runs

Organism: Oryza sativa Indica Group

Library:

Name: IR28_13dpi_r2

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Runs: 1 run, 23.6M spots, 7.1G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR29061971	23,634,987	7.1G	2.2Gb	2024-05-17

ID:: 32904781

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